LPs
(1996) Absolutego
(1998) Amplifier Worship
(2000) Flood
(2002) Heavy Rocks
(2003) Akuma No Uta
(2003) Feedbacker
(2004) The Thing Which Solomon Overlooked
(2006) Dronevil -Final-
(2006) Pink
(2006) Sound Track from Film 'Mabuta No Ura'
(2006) The Thing Which Solomon Overlooked 2 
(2006) The Thing Which Solomon Overlooked 3
(2006) Vein
(2008) Smile [Diwphalanx]
(2008) Smile [Southern Lord]
(2010) Variations
(2011) Attention Please
(2011) Heavy Rocks
(2011) New Album
(2013) Präparat
(2013) The Thing Which Solomon Overlooked Extra

Live
(2005) Archive Volume I: Live 96-98
(2005) Archive Volume II: Drumless Shows
(2005) Archive Volume III: 2 Long Songs
(2008) Smile Live at Wolf Creek
(2009) Smile - Live in Prague
(2010) Live in Japan
(2013) Boris Performing "Flood"

Singles
(2008) Statement
(2009) Japanese Heavy Rock Hits Vol. 1
(2009) Japanese Heavy Rock Hits Vol. 2
(2009) Japanese Heavy Rock Hits Vol. 3
(2009) Japanese Heavy Rock Hits Vol. 4

Collaborations
LPs
(2002) Megatone
(2005) Sun Baked Snow Cave
(2006) Altar
(2006) Rainbow
(2008) Cloud Chamber
(2010) BXI (really more of an EP) (with Ian Astbury)
(2011) Klatter

Splits
(1997) Barebones / Boris
(1999) More Echoes, Touching Air Landscape
(2007) Damaged (with Stupid Babies Go Mad)
(2007) Walrus / Groon (with Merzbow)
(2009) Chapter Ahead Being Fake (with Torche)
(2009) Golden Dance Classics (with 9dw)
(2011) Czechoslovakia / Vrah (with Saade)
(2012) Asobi Seksu / Boris
(2012) Boris / Joe Volk

Live
(1998) Black: Implication Flooding (with Keiji Haino)
(2007) Long Hair and Tights (with Doomriders)
(2007) Rock Dream (with Merzbow)